SRR18402610 (PRJNA818335)
Processing Status: Completed
General Details
Sample Name | GSM5964226 |
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Organism | Homo sapiens |
Release Date | 12/2022 |
Sample Links
GWIPS-viz | Trips-Viz | Custom Track |
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View Custom Track |
Run Details
Spots | 151536796 |
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Total Bases | 7576839800 |
Total Bases | 7576839800 |
Repository Details
SRA | SRR18402610 |
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ENA | SRR18402610 |
BioProject | PRJNA818335 |
Experiment Details
Title | Repeat 1: Scrambled shRNA - ribosome footprint RNA |
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Sample Details
Run Accession | SRR18402610 |
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Total Number Of Spots (Original File)) | 151536796 |
Total Number Of Bases (Original File) | 7576839800 |
Average Read Length | 50 |
Original File Size (Mb) | 2163 |
Experiment Id | SRX14536493 |
Library Name | GSM5964226 |
Library Strategy | OTHER |
Library Selection | other |
Library Source | TRANSCRIPTOMIC |
Library Layout | SINGLE |
Insert Size | 0 |
Insert Deviation | 0 |
Platform | ILLUMINA |
Model | Illumina NovaSeq 6000 |
Sra Project Accession (Srp) | SRP365126 |
Pubmed Id | 36653366 |
Sample | SRS12333591 |
Biosample | SAMN26855357 |
Sample Type | simple |
Organism Taxid | 9606 |
Organism | Homo sapiens |
Sample Name | GSM5964226 |
Center Name | Adrian Whitehouse, Faculty of Biological Sciences, University of Leeds |
Submission | SRA1390089 |
Month | 12 |
Year | 2022 |
Author | Murphy |
Sample Source | TREx BCBL1-Rta |
Sample Title | Repeat 1: Scrambled shRNA - ribosome footprint RNA |
Library-Type | Ribo-Seq |
Timepoint | 36 hours post KSHV lytic inductionNA |
Cell-Line | TREx BCBL1-Rta |
Cellular-Compartment | Ribosome footprint RNA |
Genotype | Stably expressing a scrambled control shRNA |
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