SRR1840399 (PRJNA277363)

Processing Status: Completed

General Details

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Sample Name GSM1625823
Organism Glycine max
Release Date 3/2018

Sample Links

Run Details

Spots 51640489
Total Bases 2582024450
Total Bases 2582024450

Repository Details

SRA SRR1840399
ENA SRR1840399
BioProject PRJNA277363

Experiment Details

Title Cotyledon (25-50 mg) Ribosome Profiling biorep 1

Sample Details

Run Accession SRR1840399
Total Number Of Spots (Original File)) 51640489
Total Number Of Bases (Original File) 2582024450
Average Read Length 50
Original File Size (Mb) 1612
Experiment Id SRX902511
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP055880
Pubmed Id 29570733
Sample SRS865195
Biosample SAMN03389597
Sample Type simple
Organism Taxid 3847
Organism Glycine max
Sample Name GSM1625823
Center Name GEO
Submission SRA245679
Month 3
Year 2018
Author Shamimuzzaman
Sample Source Cotyledon
Sample Title Cotyledon (25-50 mg) Ribosome Profiling biorep 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Tissue Cotyledon
Stage Beans fresh weight 25-50 mg
Strain Williams
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1840399 Glycine max Cotyledon Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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