SRR1840401 (PRJNA277363)

Processing Status: Completed

General Details

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Sample Name GSM1625825
Organism Glycine max
Release Date 3/2018

Sample Links

Run Details

Spots 77525914
Total Bases 7752591400
Total Bases 7752591400

Repository Details

SRA SRR1840401
ENA SRR1840401
BioProject PRJNA277363

Experiment Details

Title Cotyledon (25-50 mg) Ribosome Profiling biorep 2

Sample Details

Run Accession SRR1840401
Total Number Of Spots (Original File)) 77525914
Total Number Of Bases (Original File) 7752591400
Average Read Length 100
Original File Size (Mb) 4910
Experiment Id SRX902513
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP055880
Pubmed Id 29570733
Sample SRS865193
Biosample SAMN03389589
Sample Type simple
Organism Taxid 3847
Organism Glycine max
Sample Name GSM1625825
Center Name GEO
Submission SRA245679
Month 3
Year 2018
Author Shamimuzzaman
Sample Source Cotyledon
Sample Title Cotyledon (25-50 mg) Ribosome Profiling biorep 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Tissue Cotyledon
Stage Beans fresh weight 25-50 mg
Strain Williams
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1840401 Glycine max Cotyledon Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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