SRR1840405 (PRJNA277363)

Processing Status: Completed

General Details

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Sample Name GSM1625829
Organism Glycine max
Release Date 3/2018

Sample Links

Run Details

Spots 58241888
Total Bases 2912094400
Total Bases 2912094400

Repository Details

SRA SRR1840405
ENA SRR1840405
BioProject PRJNA277363

Experiment Details

Title Seed Coat (25-50 mg) Ribosome Profiling biorep 2

Sample Details

Run Accession SRR1840405
Total Number Of Spots (Original File)) 58241888
Total Number Of Bases (Original File) 2912094400
Average Read Length 50
Original File Size (Mb) 1632
Experiment Id SRX902517
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP055880
Pubmed Id 29570733
Sample SRS865189
Biosample SAMN03389600
Sample Type simple
Organism Taxid 3847
Organism Glycine max
Sample Name GSM1625829
Center Name GEO
Submission SRA245679
Month 3
Year 2018
Author Shamimuzzaman
Sample Source Seed Coat
Sample Title Seed Coat (25-50 mg) Ribosome Profiling biorep 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Tissue Seed Coat
Stage Beans fresh weight 25-50 mg
Strain Williams
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1840405 Glycine max Seed Coat Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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