SRR1840407 (PRJNA277363)

Processing Status: Completed

General Details

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Sample Name GSM1625831
Organism Glycine max
Release Date 3/2018

Sample Links

Run Details

Spots 86277212
Total Bases 4313860600
Total Bases 4313860600

Repository Details

SRA SRR1840407
ENA SRR1840407
BioProject PRJNA277363

Experiment Details

Title Cotyledon (100-200 mg) Ribosome Profiling biorep 1

Sample Details

Run Accession SRR1840407
Total Number Of Spots (Original File)) 86277212
Total Number Of Bases (Original File) 4313860600
Average Read Length 50
Original File Size (Mb) 2777
Experiment Id SRX902519
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP055880
Pubmed Id 29570733
Sample SRS865187
Biosample SAMN03389590
Sample Type simple
Organism Taxid 3847
Organism Glycine max
Sample Name GSM1625831
Center Name GEO
Submission SRA245679
Month 3
Year 2018
Author Shamimuzzaman
Sample Source Cotyledon
Sample Title Cotyledon (100-200 mg) Ribosome Profiling biorep 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Tissue Cotyledon
Stage Beans fresh weight 100-200 mg
Strain Williams
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1840407 Glycine max Cotyledon Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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