SRR1840413 (PRJNA277363)

Processing Status: Completed

General Details

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Sample Name GSM1625837
Organism Glycine max
Release Date 3/2018

Sample Links

Run Details

Spots 72276634
Total Bases 3613831700
Total Bases 3613831700

Repository Details

SRA SRR1840413
ENA SRR1840413
BioProject PRJNA277363

Experiment Details

Title Seed Coat (100-200 mg) Ribosome Profiling biorep 2

Sample Details

Run Accession SRR1840413
Total Number Of Spots (Original File)) 72276634
Total Number Of Bases (Original File) 3613831700
Average Read Length 50
Original File Size (Mb) 2027
Experiment Id SRX902525
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP055880
Pubmed Id 29570733
Sample SRS865181
Biosample SAMN03389593
Sample Type simple
Organism Taxid 3847
Organism Glycine max
Sample Name GSM1625837
Center Name GEO
Submission SRA245679
Month 3
Year 2018
Author Shamimuzzaman
Sample Source Seed Coat
Sample Title Seed Coat (100-200 mg) Ribosome Profiling biorep 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Tissue Seed Coat
Stage Beans fresh weight 100-200 mg
Strain Williams
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1840413 Glycine max Seed Coat Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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