SRR1840415 (PRJNA277363)

Processing Status: Completed

General Details

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Sample Name GSM1625839
Organism Glycine max
Release Date 3/2018

Sample Links

Run Details

Spots 82331167
Total Bases 4116558350
Total Bases 4116558350

Repository Details

SRA SRR1840415
ENA SRR1840415
BioProject PRJNA277363

Experiment Details

Title Cotyledon (300-400 mg) Ribosome Profiling biorep 1

Sample Details

Run Accession SRR1840415
Total Number Of Spots (Original File)) 82331167
Total Number Of Bases (Original File) 4116558350
Average Read Length 50
Original File Size (Mb) 2704
Experiment Id SRX902527
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP055880
Pubmed Id 29570733
Sample SRS865179
Biosample SAMN03389601
Sample Type simple
Organism Taxid 3847
Organism Glycine max
Sample Name GSM1625839
Center Name GEO
Submission SRA245679
Month 3
Year 2018
Author Shamimuzzaman
Sample Source Cotyledon
Sample Title Cotyledon (300-400 mg) Ribosome Profiling biorep 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Tissue Cotyledon
Stage Beans fresh weight 300-400 mg
Strain Williams
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1840415 Glycine max Cotyledon Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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