SRR1840417 (PRJNA277363)

Processing Status: Completed

General Details

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Sample Name GSM1625841
Organism Glycine max
Release Date 3/2018

Sample Links

Run Details

Spots 66026031
Total Bases 3301301550
Total Bases 3301301550

Repository Details

SRA SRR1840417
ENA SRR1840417
BioProject PRJNA277363

Experiment Details

Title Cotyledon (300-400 mg) Ribosome Profiling biorep 2

Sample Details

Run Accession SRR1840417
Total Number Of Spots (Original File)) 66026031
Total Number Of Bases (Original File) 3301301550
Average Read Length 50
Original File Size (Mb) 2153
Experiment Id SRX902529
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP055880
Pubmed Id 29570733
Sample SRS865177
Biosample SAMN03389595
Sample Type simple
Organism Taxid 3847
Organism Glycine max
Sample Name GSM1625841
Center Name GEO
Submission SRA245679
Month 3
Year 2018
Author Shamimuzzaman
Sample Source Cotyledon
Sample Title Cotyledon (300-400 mg) Ribosome Profiling biorep 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Tissue Cotyledon
Stage Beans fresh weight 300-400 mg
Strain Williams
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1840417 Glycine max Cotyledon Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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