SRR1944917 (PRJNA279785)
Processing Status: Completed
General Details
| Sample Name | GSM1646020 |
|---|---|
| Organism | Saccharomyces cerevisiae |
| Release Date | 6/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz |
Run Details
| Spots | 23857016 |
|---|---|
| Total Bases | 730283486 |
| Total Bases | 730283486 |
Repository Details
| SRA | SRR1944917 |
|---|---|
| ENA | SRR1944917 |
| BioProject | PRJNA279785 |
Experiment Details
| Title | ncs2?_ribo_YPD_rep3 |
|---|
Sample Details
| Run Accession | SRR1944917 |
|---|---|
| Total Number Of Spots (Original File)) | 23857016 |
| Total Number Of Bases (Original File) | 730283486 |
| Average Read Length | 30 |
| Original File Size (Mb) | 535 |
| Experiment Id | SRX971687 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiScanSQ |
| Sra Project Accession (Srp) | SRP056647 |
| Pubmed Id | 26052047 |
| Sample | SRS886794 |
| Biosample | SAMN03450605 |
| Sample Type | simple |
| Organism Taxid | 4932 |
| Organism | Saccharomyces cerevisiae |
| Sample Name | GSM1646020 |
| Center Name | GEO |
| Submission | SRA249088 |
| Month | 6 |
| Year | 2015 |
| Author | Nedialkova |
| Sample Source | ncs2?_ribo_YPD |
| Sample Title | ncs2?_ribo_YPD_rep3 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 3.0 |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Tissue | Whole cells |
| Strain | BY4741 |
| Genotype | ncs2-delta |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1944917 | Saccharomyces cerevisiae | ncs2?_ribo_YPD | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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