SRR1944936 (PRJNA279785)

Processing Status: Completed

General Details

View quality reports

Sample Name GSM1646039
Organism Saccharomyces cerevisiae
Release Date 6/2015

Sample Links

Run Details

Spots 22825808
Total Bases 680664501
Total Bases 680664501

Repository Details

SRA SRR1944936
ENA SRR1944936
BioProject PRJNA279785

Experiment Details

Title WT_ribo_diamide_rep1

Sample Details

Run Accession SRR1944936
Total Number Of Spots (Original File)) 22825808
Total Number Of Bases (Original File) 680664501
Average Read Length 29
Original File Size (Mb) 492
Experiment Id SRX971706
Library Name 0.0
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiScanSQ
Sra Project Accession (Srp) SRP056647
Pubmed Id 26052047
Sample SRS886774
Biosample SAMN03450644
Sample Type simple
Organism Taxid 4932
Organism Saccharomyces cerevisiae
Sample Name GSM1646039
Center Name GEO
Submission SRA249088
Month 6
Year 2015
Author Nedialkova
Sample Source WT_ribo_diamide
Sample Title WT_ribo_diamide_rep1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Wild Type
Inhibitor Cycloheximide
Timepoint NANA
Tissue Whole cells
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain BY4741
Age 0.0
Infected 0.0
Disease 0.0
Genotype wild-type
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1944936 Saccharomyces cerevisiae WT_ribo_diamide 0.0 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About