SRR1964309 (PRJNA280809)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM1655060 |
|---|---|
| Organism | Mus musculus |
| Release Date | 1/2016 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 46953344 |
|---|---|
| Total Bases | 2347667200 |
| Total Bases | 2347667200 |
Repository Details
| SRA | SRR1964309 |
|---|---|
| ENA | SRR1964309 |
| BioProject | PRJNA280809 |
Experiment Details
| Title | Ribosome Profiling control replicate 2 |
|---|
Sample Details
| Run Accession | SRR1964309 |
|---|---|
| Total Number Of Spots (Original File)) | 46953344 |
| Total Number Of Bases (Original File) | 2347667200 |
| Average Read Length | 50 |
| Original File Size (Mb) | 1529 |
| Experiment Id | SRX986366 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ABI_SOLID |
| Model | AB 5500xl-W Genetic Analysis System |
| Sra Project Accession (Srp) | SRP057051 |
| Pubmed Id | 26764022 |
| Sample | SRS901273 |
| Biosample | SAMN03470224 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM1655060 |
| Center Name | GEO |
| Submission | SRA252983 |
| Month | 1 |
| Year | 2016 |
| Author | Popa |
| Sample Source | embryonic stem cell line CGR8 |
| Sample Title | Ribosome Profiling control replicate 2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Condition | Wild Type |
| Inhibitor | Harringtonine |
| Tissue | Embryo |
| Cell-Line | CGR8 |
| Strain | 129 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1964309 | Mus musculus | embryonic stem cell line CGR8 | CGR8 | Ribo-Seq | Harringtonine |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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