SRR2007066 (PRJNA282960)

Processing Status: Failed

General Details

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Sample Name GSM1666807
Organism Mus musculus
Release Date 1/2016

Sample Links

Run Details

Spots 22014222
Total Bases 1122725322
Total Bases 1122725322

Repository Details

SRA SRR2007066
ENA SRR2007066
BioProject PRJNA282960

Experiment Details

Title ATF4-/- ER ribosome profiling, 0.5 h Tg (rep 1)

Sample Details

Run Accession SRR2007066
Total Number Of Spots (Original File)) 22014222
Total Number Of Bases (Original File) 1122725322
Average Read Length 51
Original File Size (Mb) 696
Experiment Id SRX1017037
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP057991
Pubmed Id <NA>
Sample SRS928314
Biosample SAMN03581117
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1666807
Center Name GEO
Submission SRA266203
Month 1
Year 2016
Sample Source ATF4-/- mouse embryonic fibroblasts, ER, 0.5 h Tg
Sample Title ATF4-/- ER ribosome profiling, 0.5 h Tg (rep 1)
Library-Type Ribo-Seq
Condition Test
Inhibitor thapsigargin
Tissue Embryo
Cell-Line Fibroblast
Cellular-Compartment Endoplasmic reticulum
Genotype ATF4-/-
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2007066 Mus musculus ATF4-/- mouse embryonic fibroblasts, ER, 0.5 h Tg Fibroblast Ribo-Seq thapsigargin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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