SRR2007087 (PRJNA282960)

Processing Status: Failed

General Details

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Sample Name GSM1666828
Organism Mus musculus
Release Date 1/2016

Sample Links

Run Details

Spots 17567181
Total Bases 895926231
Total Bases 895926231

Repository Details

SRA SRR2007087
ENA SRR2007087
BioProject PRJNA282960

Experiment Details

Title eIF2A S51A cytosol ribosome profiling, 1 h Tg (rep 1)

Sample Details

Run Accession SRR2007087
Total Number Of Spots (Original File)) 17567181
Total Number Of Bases (Original File) 895926231
Average Read Length 51
Original File Size (Mb) 519
Experiment Id SRX1017058
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP057991
Pubmed Id <NA>
Sample SRS928292
Biosample SAMN03581061
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1666828
Center Name GEO
Submission SRA266203
Month 1
Year 2016
Sample Source eIF2a S51A mouse embryonic fibroblasts, cytosol, 1 h Tg
Sample Title eIF2A S51A cytosol ribosome profiling, 1 h Tg (rep 1)
Library-Type Ribo-Seq
Condition Test
Inhibitor thapsigargin
Timepoint 1h
Tissue Embryo
Cell-Line Fibroblast
Cellular-Compartment Cytoplasmic
Genotype eIF2a S51A
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2007087 Mus musculus eIF2a S51A mouse embryonic fibroblasts, cytosol, 1 h Tg Fibroblast Ribo-Seq thapsigargin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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