SRR2007088 (PRJNA282960)

Processing Status: Failed

General Details

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Sample Name GSM1666829
Organism Mus musculus
Release Date 1/2016

Sample Links

Run Details

Spots 19935281
Total Bases 1016699331
Total Bases 1016699331

Repository Details

SRA SRR2007088
ENA SRR2007088
BioProject PRJNA282960

Experiment Details

Title eIF2A S51A ER ribosome profiling, 1 h Tg (rep 1)

Sample Details

Run Accession SRR2007088
Total Number Of Spots (Original File)) 19935281
Total Number Of Bases (Original File) 1016699331
Average Read Length 51
Original File Size (Mb) 582
Experiment Id SRX1017059
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP057991
Pubmed Id <NA>
Sample SRS928291
Biosample SAMN03581062
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1666829
Center Name GEO
Submission SRA266203
Month 1
Year 2016
Sample Source eIF2a S51A mouse embryonic fibroblasts, ER, 1 h Tg
Sample Title eIF2A S51A ER ribosome profiling, 1 h Tg (rep 1)
Library-Type Ribo-Seq
Condition Test
Inhibitor thapsigargin
Timepoint 1h
Tissue Embryo
Cell-Line Fibroblast
Cellular-Compartment Endoplasmic reticulum
Genotype eIF2a S51A
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2007088 Mus musculus eIF2a S51A mouse embryonic fibroblasts, ER, 1 h Tg Fibroblast Ribo-Seq thapsigargin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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