SRR2007092 (PRJNA282960)

General Details

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Sample Name GSM1666833
Organism Mus musculus
Release Date 1/2016

Sample Links

Run Details

Spots 15210074
Total Bases 775713774
Total Bases 775713774

Repository Details

SRA SRR2007092
ENA SRR2007092
BioProject PRJNA282960

Experiment Details

Title eIF2A S51A ER ribosome profiling, 4 h Tg (rep 1)

Sample Details

Run Accession SRR2007092
Total Number Of Spots (Original File)) 15210074
Total Number Of Bases (Original File) 775713774
Average Read Length 51
Original File Size (Mb) 444
Experiment Id SRX1017063
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP057991
Pubmed Id <NA>
Sample SRS928287
Biosample SAMN03581066
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1666833
Center Name GEO
Submission SRA266203
Month 1
Year 2016
Sample Source eIF2a S51A mouse embryonic fibroblasts, ER, 4 h Tg
Sample Title eIF2A S51A ER ribosome profiling, 4 h Tg (rep 1)
Library-Type Ribo-Seq
Condition Test
Inhibitor thapsigargin
Timepoint 4h
Tissue Embryo
Cell-Line mouse embryonic fibroblasts
Cellular-Compartment Endoplasmic reticulum
Genotype eIF2a S51A
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2007092 Mus musculus eIF2a S51A mouse embryonic fibroblasts, ER, 4 h Tg mouse embryonic fibroblasts Ribo-Seq thapsigargin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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