SRR2007101 (PRJNA282960)

Processing Status: Failed

General Details

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Sample Name GSM1666842
Organism Mus musculus
Release Date 1/2016

Sample Links

Run Details

Spots 20573167
Total Bases 1049231517
Total Bases 1049231517

Repository Details

SRA SRR2007101
ENA SRR2007101
BioProject PRJNA282960

Experiment Details

Title eIF2A S51A ER ribosome profiling, 4 h Tg (rep 2)

Sample Details

Run Accession SRR2007101
Total Number Of Spots (Original File)) 20573167
Total Number Of Bases (Original File) 1049231517
Average Read Length 51
Original File Size (Mb) 644
Experiment Id SRX1017072
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP057991
Pubmed Id <NA>
Sample SRS928278
Biosample SAMN03581075
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1666842
Center Name GEO
Submission SRA266203
Month 1
Year 2016
Sample Source eIF2a S51A mouse embryonic fibroblasts, ER, 4 h Tg
Sample Title eIF2A S51A ER ribosome profiling, 4 h Tg (rep 2)
Library-Type Ribo-Seq
Condition Test
Inhibitor thapsigargin
Timepoint 4h
Tissue Embryo
Cell-Line Fibroblast
Cellular-Compartment Endoplasmic reticulum
Genotype eIF2a S51A
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2007101 Mus musculus eIF2a S51A mouse embryonic fibroblasts, ER, 4 h Tg Fibroblast Ribo-Seq thapsigargin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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