SRR2007782 (PRJNA282960)

Processing Status: Failed

General Details

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Sample Name GSM1674123
Organism Mus musculus
Release Date 1/2016

Sample Links

Run Details

Spots 15876938
Total Bases 809723838
Total Bases 809723838

Repository Details

SRA SRR2007782
ENA SRR2007782
BioProject PRJNA282960

Experiment Details

Title WT cytosol ribosome profiling, 4 h Tg (rep2)

Sample Details

Run Accession SRR2007782
Total Number Of Spots (Original File)) 15876938
Total Number Of Bases (Original File) 809723838
Average Read Length 51
Original File Size (Mb) 514
Experiment Id SRX1017492
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP057991
Pubmed Id <NA>
Sample SRS928740
Biosample SAMN03581041
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1674123
Center Name GEO
Submission SRA266203
Month 1
Year 2016
Sample Source C57BL/6 mouse embryonic fibroblasts, cytosol, 4 h Tg
Sample Title WT cytosol ribosome profiling, 4 h Tg (rep2)
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Wild Type
Inhibitor thapsigargin
Timepoint 4h
Tissue Embryo
Cell-Line Fibroblast
Cellular-Compartment Cytoplasmic
Strain C57BL/6
Genotype WT
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2007782 Mus musculus C57BL/6 mouse embryonic fibroblasts, cytosol, 4 h Tg Fibroblast Ribo-Seq thapsigargin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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