SRR2007783 (PRJNA282960)

Processing Status: Failed

General Details

View quality reports

Sample Name GSM1674124
Organism Mus musculus
Release Date 1/2016

Sample Links

Run Details

Spots 8558520
Total Bases 436484520
Total Bases 436484520

Repository Details

SRA SRR2007783
ENA SRR2007783
BioProject PRJNA282960

Experiment Details

Title WT ER ribosome profiling, 4 h Tg (rep1)

Sample Details

Run Accession SRR2007783
Total Number Of Spots (Original File)) 8558520
Total Number Of Bases (Original File) 436484520
Average Read Length 51
Original File Size (Mb) 280
Experiment Id SRX1017493
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP057991
Pubmed Id <NA>
Sample SRS928739
Biosample SAMN03581042
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1674124
Center Name GEO
Submission SRA266203
Month 1
Year 2016
Sample Source C57BL/6 mouse embryonic fibroblasts, ER, 4 h Tg
Sample Title WT ER ribosome profiling, 4 h Tg (rep1)
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Wild Type
Inhibitor thapsigargin
Timepoint 4h
Tissue Embryo
Cell-Line Fibroblast
Cellular-Compartment Endoplasmic reticulum
Strain C57BL/6
Genotype WT
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2007783 Mus musculus C57BL/6 mouse embryonic fibroblasts, ER, 4 h Tg Fibroblast Ribo-Seq thapsigargin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About