SRR20138949 (PRJNA858256)

Processing Status: Not Yet Started

General Details

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Sample Name GSM6336920
Organism Haloferax volcanii
Release Date 1/2023

Sample Links

Run Details

Spots 22835463
Total Bases 1735495188
Total Bases 1735495188

Repository Details

SRA SRR20138949
ENA SRR20138949
BioProject PRJNA858256

Experiment Details

Title wild-type, MNase, RNA-seq, Replicate 2

Sample Details

Run Accession SRR20138949
Total Number Of Spots (Original File)) 22835463
Total Number Of Bases (Original File) 1735495188
Average Read Length 76
Original File Size (Mb) 719
Experiment Id SRX16174094
Library Name GSM6336920
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP386192
Pubmed Id 37223747
Sample SRS13835898
Biosample SAMN29680387
Sample Type simple
Organism Taxid 2246
Organism Haloferax volcanii
Sample Name GSM6336920
Center Name Bioinformatics Group (AG Backofen), Department of Computer Science, Albert-Ludwigs-University Freiburg
Submission SRA1454229
Month 1
Year 2023
Author Hadjeras
Sample Source archaea
Sample Title wild-type, MNase, RNA-seq, Replicate 2
Library-Type RNA-Seq
Replicate-Number 2.0
Condition Wild Type
Inhibitor untreated
Tissue archaea
Cell-Line archaea
Strain H119
Genotype wild type
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR20138949 Haloferax volcanii archaea archaea RNA-Seq untreated
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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