SRR20138951 (PRJNA858256)

Processing Status: Completed

General Details

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Sample Name GSM6336918
Organism Haloferax volcanii
Release Date 1/2023

Sample Links

Run Details

Spots 24541930
Total Bases 1865186680
Total Bases 1865186680

Repository Details

SRA SRR20138951
ENA SRR20138951
BioProject PRJNA858256

Experiment Details

Title wild-type, RNaseI, RIBO-seq, Replicate 1

Sample Details

Run Accession SRR20138951
Total Number Of Spots (Original File)) 24541930
Total Number Of Bases (Original File) 1865186680
Average Read Length 76
Original File Size (Mb) 763
Experiment Id SRX16174092
Library Name GSM6336918
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP386192
Pubmed Id 37223747
Sample SRS13835896
Biosample SAMN29680389
Sample Type simple
Organism Taxid 2246
Organism Haloferax volcanii
Sample Name GSM6336918
Center Name Bioinformatics Group (AG Backofen), Department of Computer Science, Albert-Ludwigs-University Freiburg
Submission SRA1454229
Month 1
Year 2023
Author Hadjeras
Sample Source archaea
Sample Title wild-type, RNaseI, RIBO-seq, Replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Wild Type
Inhibitor untreated
Tissue archaea
Cell-Line archaea
Strain H119
Genotype wild type
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR20138951 Haloferax volcanii archaea archaea Ribo-Seq untreated
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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