SRR20138952 (PRJNA858256)
Processing Status: Completed
General Details
| Sample Name | GSM6336917 |
|---|---|
| Organism | Haloferax volcanii |
| Release Date | 1/2023 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 19878881 |
|---|---|
| Total Bases | 1510794956 |
| Total Bases | 1510794956 |
Repository Details
| SRA | SRR20138952 |
|---|---|
| ENA | SRR20138952 |
| BioProject | PRJNA858256 |
Experiment Details
| Title | wild-type, MNase, RIBO-seq, Replicate 2 |
|---|
Sample Details
| Run Accession | SRR20138952 |
|---|---|
| Total Number Of Spots (Original File)) | 19878881 |
| Total Number Of Bases (Original File) | 1510794956 |
| Average Read Length | 76 |
| Original File Size (Mb) | 614 |
| Experiment Id | SRX16174091 |
| Library Name | GSM6336917 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP386192 |
| Pubmed Id | 37223747 |
| Sample | SRS13835895 |
| Biosample | SAMN29680390 |
| Sample Type | simple |
| Organism Taxid | 2246 |
| Organism | Haloferax volcanii |
| Sample Name | GSM6336917 |
| Center Name | Bioinformatics Group (AG Backofen), Department of Computer Science, Albert-Ludwigs-University Freiburg |
| Submission | SRA1454229 |
| Month | 1 |
| Year | 2023 |
| Author | Hadjeras |
| Sample Source | archaea |
| Sample Title | wild-type, MNase, RIBO-seq, Replicate 2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Condition | Wild Type |
| Inhibitor | untreated |
| Tissue | archaea |
| Cell-Line | archaea |
| Strain | H119 |
| Genotype | wild type |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR20138952 | Haloferax volcanii | archaea | archaea | Ribo-Seq | untreated |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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