SRR20142185 (PRJNA858420)

Processing Status: Completed

General Details

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Sample Name GSM6337660
Organism Homo sapiens
Release Date 7/2023

Sample Links

Run Details

Spots 54243380
Total Bases 2712169000
Total Bases 2712169000

Repository Details

SRA SRR20142185
ENA SRR20142185
BioProject PRJNA858420

Experiment Details

Title Ribosome_Footprint_seq_A549_GFP_2

Sample Details

Run Accession SRR20142185
Total Number Of Spots (Original File)) 54243380
Total Number Of Bases (Original File) 2712169000
Average Read Length 50
Original File Size (Mb) 807
Experiment Id SRX16177177
Library Name GSM6337660
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model HiSeq X Ten
Sra Project Accession (Srp) SRP386256
Pubmed Id <NA>
Sample SRS13838719
Biosample SAMN29715111
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM6337660
Center Name Laboratory of Muscle Stem Cells and Gene Regulation, NIAMS, NIH
Submission SRA1454276
Month 7
Year 2023
Author Sartorelli
Sample Source A549
Sample Title Ribosome_Footprint_seq_A549_GFP_2
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor 0.0
Timepoint NANA
Tissue Lung
Cell-Line A549
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 0.0
Infected 0.0
Disease 0.0
Genotype WT
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR20142185 Homo sapiens A549 A549 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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