SRR2016463 (PRJNA283800)
Processing Status: Completed
General Details
| Sample Name | GSM1680891 |
|---|---|
| Organism | Escherichia coli |
| Release Date | 7/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz |
Run Details
| Spots | 32997315 |
|---|---|
| Total Bases | 1187903340 |
| Total Bases | 1187903340 |
Repository Details
| SRA | SRR2016463 |
|---|---|
| ENA | SRR2016463 |
| BioProject | PRJNA283800 |
Experiment Details
| Title | osm RPF |
|---|
Sample Details
| Run Accession | SRR2016463 |
|---|---|
| Total Number Of Spots (Original File)) | 32997315 |
| Total Number Of Bases (Original File) | 1187903340 |
| Average Read Length | 36 |
| Original File Size (Mb) | 1313 |
| Experiment Id | SRX1023522 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina Genome Analyzer IIx |
| Sra Project Accession (Srp) | SRP058200 |
| Pubmed Id | 26857681 |
| Sample | SRS933225 |
| Biosample | SAMN03652531 |
| Sample Type | simple |
| Organism Taxid | 1403831 |
| Organism | Escherichia coli |
| Sample Name | GSM1680891 |
| Center Name | GEO |
| Submission | SRA267717 |
| Month | 7 |
| Year | 2015 |
| Author | Bartholomäus |
| Sample Source | E. coli MC4100, osm |
| Sample Title | osm RPF |
| Library-Type | Ribo-Seq |
| Strain | MC4100 |
| Growth-Condition | MM medium (12.8 g/l Na2HPO4×7H2O, 3 g/l KH2PO4, 1 g/l NH4Cl, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose) |
| Stress | osmotic stress 20min |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR2016463 | Escherichia coli | E. coli MC4100, osm | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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