SRR2052911 (PRJNA285961)

Processing Status: Completed

General Details

View quality reports

Sample Name GSM1704503
Organism Homo sapiens
Release Date 9/2016

Sample Links

Run Details

Spots 16250647
Total Bases 828782997
Total Bases 828782997

Repository Details

SRA SRR2052911
ENA SRR2052911
BioProject PRJNA285961

Experiment Details

Title 6 h infection cytosol ribosome profiling (Rep 1)

Sample Details

Run Accession SRR2052911
Total Number Of Spots (Original File)) 16250647
Total Number Of Bases (Original File) 828782997
Average Read Length 51
Original File Size (Mb) 523
Experiment Id SRX1050328
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP059187
Pubmed Id 29321322
Sample SRS954647
Biosample SAMN03763400
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM1704503
Center Name GEO
Submission SRA271639
Month 9
Year 2016
Author Reid
Sample Source Huh7 cells
Sample Title 6 h infection cytosol ribosome profiling (Rep 1)
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Test
Inhibitor Cycloheximide
Tissue Liver
Cell-Line Huh7
Cellular-Compartment Cytoplasmic
Strain DENV2 (M29095.1)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2052911 Homo sapiens Huh7 cells Huh7 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About