SRR2052912 (PRJNA285961)

Processing Status: Completed

General Details

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Sample Name GSM1704504
Organism Homo sapiens
Release Date 9/2016

Sample Links

Run Details

Spots 18073831
Total Bases 921765381
Total Bases 921765381

Repository Details

SRA SRR2052912
ENA SRR2052912
BioProject PRJNA285961

Experiment Details

Title 6 h infection ER ribosome profiling (Rep 1)

Sample Details

Run Accession SRR2052912
Total Number Of Spots (Original File)) 18073831
Total Number Of Bases (Original File) 921765381
Average Read Length 51
Original File Size (Mb) 568
Experiment Id SRX1050329
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP059187
Pubmed Id 29321322
Sample SRS954645
Biosample SAMN03763401
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM1704504
Center Name GEO
Submission SRA271639
Month 9
Year 2016
Author Reid
Sample Source Huh7 cells
Sample Title 6 h infection ER ribosome profiling (Rep 1)
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Test
Inhibitor Cycloheximide
Tissue Liver
Cell-Line Huh7
Cellular-Compartment Endoplasmic reticulum
Strain DENV2 (M29095.1)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2052912 Homo sapiens Huh7 cells Huh7 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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