SRR2052988 (PRJNA285961)

Processing Status: Completed

General Details

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Sample Name GSM1704580
Organism Homo sapiens
Release Date 9/2016

Sample Links

Run Details

Spots 30257426
Total Bases 1543128726
Total Bases 1543128726

Repository Details

SRA SRR2052988
ENA SRR2052988
BioProject PRJNA285961

Experiment Details

Title Uninfected Total cell lysate ribosome profiling (rep 1)

Sample Details

Run Accession SRR2052988
Total Number Of Spots (Original File)) 30257426
Total Number Of Bases (Original File) 1543128726
Average Read Length 51
Original File Size (Mb) 1024
Experiment Id SRX1050405
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP059187
Pubmed Id 29321322
Sample SRS954576
Biosample SAMN03763472
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM1704580
Center Name GEO
Submission SRA271639
Month 9
Year 2016
Author Reid
Sample Source Huh7 cells
Sample Title Uninfected Total cell lysate ribosome profiling (rep 1)
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Control
Inhibitor Cycloheximide
Tissue Liver
Cell-Line Huh7
Cellular-Compartment Total cell lysate
Strain none
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2052988 Homo sapiens Huh7 cells Huh7 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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