SRR2052990 (PRJNA285961)

Processing Status: Completed

General Details

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Sample Name GSM1704582
Organism Homo sapiens
Release Date 9/2016

Sample Links

Run Details

Spots 35106005
Total Bases 1790406255
Total Bases 1790406255

Repository Details

SRA SRR2052990
ENA SRR2052990
BioProject PRJNA285961

Experiment Details

Title 24 h DENV1 infection Total cell lysate ribosome profiling (rep 2)

Sample Details

Run Accession SRR2052990
Total Number Of Spots (Original File)) 35106005
Total Number Of Bases (Original File) 1790406255
Average Read Length 51
Original File Size (Mb) 1201
Experiment Id SRX1050407
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP059187
Pubmed Id 29321322
Sample SRS954574
Biosample SAMN03763474
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM1704582
Center Name GEO
Submission SRA271639
Month 9
Year 2016
Author Reid
Sample Source Huh7 cells
Sample Title 24 h DENV1 infection Total cell lysate ribosome profiling (rep 2)
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Test
Inhibitor Cycloheximide
Tissue Liver
Cell-Line Huh7
Cellular-Compartment Total cell lysate
Strain DENV1 (EU081230.1)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2052990 Homo sapiens Huh7 cells Huh7 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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