SRR2060678 (PRJNA286792)

General Details

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Sample Name GSM1709016
Organism Mus musculus
Release Date 10/2015

Sample Links

Run Details

Spots 7836885
Total Bases 399681135
Total Bases 399681135

Repository Details

SRA SRR2060678
ENA SRR2060678
BioProject PRJNA286792

Experiment Details

Title ER Ribosome profiling 4 h Tg 1

Sample Details

Run Accession SRR2060678
Total Number Of Spots (Original File)) 7836885
Total Number Of Bases (Original File) 399681135
Average Read Length 51
Original File Size (Mb) 259
Experiment Id SRX1056753
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP059390
Pubmed Id 27161320
Sample SRS959373
Biosample SAMN03770661
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1709016
Center Name GEO
Submission SRA272681
Month 10
Year 2015
Author Reid
Sample Source Mouse embryonic fibroblasts, GADD34-/-
Sample Title ER Ribosome profiling 4 h Tg 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Test
Timepoint 4h
Tissue Embryo
Cell-Line embryonic fibroblast
Cellular-Compartment Endoplasmic reticulum
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2060678 Mus musculus Mouse embryonic fibroblasts, GADD34-/- embryonic fibroblast Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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