SRR2060679 (PRJNA286792)

General Details

View quality reports

Sample Name GSM1709017
Organism Mus musculus
Release Date 10/2015

Sample Links

Run Details

Spots 12238357
Total Bases 624156207
Total Bases 624156207

Repository Details

SRA SRR2060679
ENA SRR2060679
BioProject PRJNA286792

Experiment Details

Title ER Ribosome profiling Untreated 2

Sample Details

Run Accession SRR2060679
Total Number Of Spots (Original File)) 12238357
Total Number Of Bases (Original File) 624156207
Average Read Length 51
Original File Size (Mb) 428
Experiment Id SRX1056754
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP059390
Pubmed Id 27161320
Sample SRS959372
Biosample SAMN03770662
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1709017
Center Name GEO
Submission SRA272681
Month 10
Year 2015
Author Reid
Sample Source Mouse embryonic fibroblasts, GADD34-/-
Sample Title ER Ribosome profiling Untreated 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Control
Inhibitor untreated
Tissue Embryo
Cell-Line embryonic fibroblast
Cellular-Compartment Endoplasmic reticulum
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2060679 Mus musculus Mouse embryonic fibroblasts, GADD34-/- embryonic fibroblast Ribo-Seq untreated
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About