SRR2060679 (PRJNA286792)
Processing Status: Failed
General Details
| Sample Name | GSM1709017 |
|---|---|
| Organism | Mus musculus |
| Release Date | 10/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit GWIPS-viz |
Run Details
| Spots | 12238357 |
|---|---|
| Total Bases | 624156207 |
| Total Bases | 624156207 |
Repository Details
| SRA | SRR2060679 |
|---|---|
| ENA | SRR2060679 |
| BioProject | PRJNA286792 |
Experiment Details
| Title | ER Ribosome profiling Untreated 2 |
|---|
Sample Details
| Run Accession | SRR2060679 |
|---|---|
| Total Number Of Spots (Original File)) | 12238357 |
| Total Number Of Bases (Original File) | 624156207 |
| Average Read Length | 51 |
| Original File Size (Mb) | 428 |
| Experiment Id | SRX1056754 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP059390 |
| Pubmed Id | 27161320 |
| Sample | SRS959372 |
| Biosample | SAMN03770662 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM1709017 |
| Center Name | GEO |
| Submission | SRA272681 |
| Month | 10 |
| Year | 2015 |
| Author | Reid |
| Sample Source | Mouse embryonic fibroblasts, GADD34-/- |
| Sample Title | ER Ribosome profiling Untreated 2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Condition | Control |
| Inhibitor | untreated |
| Tissue | Embryo |
| Cell-Line | Fibroblast |
| Cellular-Compartment | Endoplasmic reticulum |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR2060679 | Mus musculus | Mouse embryonic fibroblasts, GADD34-/- | Fibroblast | Ribo-Seq | untreated |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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