SRR2126515 (PRJNA290912)
Processing Status: Completed
General Details
| Sample Name | GSM1832724 |
|---|---|
| Organism | Mus musculus |
| Release Date | 4/2016 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 25236826 |
|---|---|
| Total Bases | 1287078126 |
| Total Bases | 1287078126 |
Repository Details
| SRA | SRR2126515 |
|---|---|
| ENA | SRR2126515 |
| BioProject | PRJNA290912 |
Experiment Details
| Title | Ribo-Seq, Msi2 shRNA, rep.3 |
|---|
Sample Details
| Run Accession | SRR2126515 |
|---|---|
| Total Number Of Spots (Original File)) | 25236826 |
| Total Number Of Bases (Original File) | 1287078126 |
| Average Read Length | 51 |
| Original File Size (Mb) | 574 |
| Experiment Id | SRX1117791 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP061564 |
| Pubmed Id | 27034466 |
| Sample | SRS1010949 |
| Biosample | SAMN03922774 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM1832724 |
| Center Name | GEO |
| Submission | SRA280016 |
| Month | 4 |
| Year | 2016 |
| Author | Bennett |
| Sample Source | keratinocytes |
| Sample Title | Ribo-Seq, Msi2 shRNA, rep.3 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 3.0 |
| Condition | Test |
| Cell-Line | Spontaneously Immortalized Mouse Keratinocyte Culture |
| Strain | C57BL/6 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR2126515 | Mus musculus | keratinocytes | Spontaneously Immortalized Mouse Keratinocyte Culture | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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