SRR21308169 (PRJNA874814)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM6523426 |
|---|---|
| Organism | Mus musculus |
| Release Date | 12/2022 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 16911088 |
|---|---|
| Total Bases | 828643312 |
| Total Bases | 828643312 |
Repository Details
| SRA | SRR21308169 |
|---|---|
| ENA | SRR21308169 |
| BioProject | PRJNA874814 |
Experiment Details
| Title | Ribo-seq MCMV 2hpi - Harringtonin - Rep 5 |
|---|
Sample Details
| Run Accession | SRR21308169 |
|---|---|
| Total Number Of Spots (Original File)) | 16911088 |
| Total Number Of Bases (Original File) | 828643312 |
| Average Read Length | 49 |
| Original File Size (Mb) | 515 |
| Experiment Id | SRX17314790 |
| Library Name | GSM6523426 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP394789 |
| Pubmed Id | <NA> |
| Sample | SRS14876278 |
| Biosample | SAMN30571921 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM6523426 |
| Center Name | Institute of Virology and Immunobiology, University of Wuerzburg |
| Submission | SRA1487448 |
| Month | 12 |
| Year | 2022 |
| Author | 0.0 |
| Sample Source | NIH-3T3 Murine embryonic fibroblasts |
| Sample Title | Ribo-seq MCMV 2hpi - Harringtonin - Rep 5 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 5.0 |
| Condition | 0.0 |
| Inhibitor | Lactimidomycin |
| Timepoint | 24h |
| Tissue | Embryo |
| Cell-Line | 3T3 |
| Cellular-Compartment | 0.0 |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | 0.0 |
| Age | 0.0 |
| Infected | MCMV |
| Disease | 0.0 |
| Genotype | 0.0 |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | GGCA |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR21308169 | Mus musculus | NIH-3T3 Murine embryonic fibroblasts | 3T3 | Ribo-Seq | Lactimidomycin |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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