SRR21308206 (PRJNA874814)

Processing Status: Not Yet Started

General Details

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Sample Name GSM6523409
Organism Mus musculus
Release Date 12/2022

Sample Links

Run Details

Spots 25534073
Total Bases 1251169577
Total Bases 1251169577

Repository Details

SRA SRR21308206
ENA SRR21308206
BioProject PRJNA874814

Experiment Details

Title Ribo-seq MCMV 2hpi - Harringtonin - Rep 3

Sample Details

Run Accession SRR21308206
Total Number Of Spots (Original File)) 25534073
Total Number Of Bases (Original File) 1251169577
Average Read Length 49
Original File Size (Mb) 949
Experiment Id SRX17314773
Library Name GSM6523409
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP394789
Pubmed Id <NA>
Sample SRS14876261
Biosample SAMN30571938
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM6523409
Center Name Institute of Virology and Immunobiology, University of Wuerzburg
Submission SRA1487448
Month 12
Year 2022
Author 0.0
Sample Source NIH-3T3 Murine embryonic fibroblasts
Sample Title Ribo-seq MCMV 2hpi - Harringtonin - Rep 3
Library-Type Ribo-Seq
Replicate-Number 3.0
Condition 0.0
Inhibitor Lactimidomycin
Timepoint NANA_Mock
Tissue Embryo
Cell-Line 3T3
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 0.0
Infected Mock
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information TTGT
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR21308206 Mus musculus NIH-3T3 Murine embryonic fibroblasts 3T3 Ribo-Seq Lactimidomycin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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