SRR2188088 (PRJNA294100)
Processing Status: Completed
General Details
| Sample Name | GSM1862952 |
|---|---|
| Organism | Trypanosoma brucei |
| Release Date | 12/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 64636189 |
|---|---|
| Total Bases | 2326902804 |
| Total Bases | 2326902804 |
Repository Details
| SRA | SRR2188088 |
|---|---|
| ENA | SRR2188088 |
| BioProject | PRJNA294100 |
Experiment Details
| Title | PCF RiboProf replicate_3 reanalysis |
|---|
Sample Details
| Run Accession | SRR2188088 |
|---|---|
| Total Number Of Spots (Original File)) | 64636189 |
| Total Number Of Bases (Original File) | 2326902804 |
| Average Read Length | 36 |
| Original File Size (Mb) | 1382 |
| Experiment Id | SRX1166330 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina Genome Analyzer II |
| Sra Project Accession (Srp) | SRP062914 |
| Pubmed Id | 26393539 |
| Sample | SRS1046665 |
| Biosample | SAMN04014719 |
| Sample Type | simple |
| Organism Taxid | 5691 |
| Organism | Trypanosoma brucei |
| Sample Name | GSM1862952 |
| Center Name | GEO |
| Submission | SRA291745 |
| Month | 12 |
| Year | 2015 |
| Author | Parsons |
| Sample Source | Tb927 PCF in SDM79 medium |
| Sample Title | PCF RiboProf replicate_3 reanalysis |
| Library-Type | Ribo-Seq |
| Stage | Procyclic Form |
| Strain | 927 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR2188088 | Trypanosoma brucei | Tb927 PCF in SDM79 medium | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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