SRR24072145 (PRJNA935940)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM7122450 |
|---|---|
| Organism | Mus musculus |
| Release Date | 2/2024 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 17997077 |
|---|---|
| Total Bases | 1511754468 |
| Total Bases | 1511754468 |
Repository Details
| SRA | SRR24072145 |
|---|---|
| ENA | SRR24072145 |
| BioProject | PRJNA935940 |
Experiment Details
| Title | SMCTRAP-Athero_123_IP |
|---|
Sample Details
| Run Accession | SRR24072145 |
|---|---|
| Total Number Of Spots (Original File)) | 17997077 |
| Total Number Of Bases (Original File) | 1511754468 |
| Average Read Length | 84 |
| Original File Size (Mb) | 622 |
| Experiment Id | SRX19873296 |
| Library Name | GSM7122450 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP423221 |
| Pubmed Id | 38289873 |
| Sample | SRS17228557 |
| Biosample | SAMN33965599 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM7122450 |
| Center Name | University of Eastern Finland |
| Submission | SRA1612470 |
| Month | 2 |
| Year | 2024 |
| Author | Ravindran |
| Sample Source | Thoracic aorta |
| Sample Title | SMCTRAP-Athero_123_IP |
| Library-Type | 0.0 |
| Replicate-Number | 0.0 |
| Condition | Test |
| Inhibitor | 0.0 |
| Timepoint | NANA |
| Tissue | Thoracic aorta |
| Cell-Line | 0.0 |
| Cellular-Compartment | smooth muscle cell specific ribosome-associated RNA (IP) |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | female |
| Strain | 0.0 |
| Age | 0.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | EGFP (+), LDLR (-/-), ApoB (100/100) |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR24072145 | Mus musculus | Thoracic aorta | 0.0 | 0.0 | 0.0 |  |
 |
 |
 |
|
|
||
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About