SRR24072155 (PRJNA935940)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM7122440 |
|---|---|
| Organism | Mus musculus |
| Release Date | 2/2024 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 18030562 |
|---|---|
| Total Bases | 1406383836 |
| Total Bases | 1406383836 |
Repository Details
| SRA | SRR24072155 |
|---|---|
| ENA | SRR24072155 |
| BioProject | PRJNA935940 |
Experiment Details
| Title | SMCTRAP-Athero_109_IP |
|---|
Sample Details
| Run Accession | SRR24072155 |
|---|---|
| Total Number Of Spots (Original File)) | 18030562 |
| Total Number Of Bases (Original File) | 1406383836 |
| Average Read Length | 78 |
| Original File Size (Mb) | 592 |
| Experiment Id | SRX19873286 |
| Library Name | GSM7122440 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP423221 |
| Pubmed Id | 38289873 |
| Sample | SRS17228546 |
| Biosample | SAMN33965609 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM7122440 |
| Center Name | University of Eastern Finland |
| Submission | SRA1612470 |
| Month | 2 |
| Year | 2024 |
| Author | Ravindran |
| Sample Source | Thoracic aorta |
| Sample Title | SMCTRAP-Athero_109_IP |
| Tissue | Thoracic aorta |
| Cellular-Compartment | smooth muscle cell specific ribosome-associated RNA (IP) |
| Sex | male |
| Genotype | EGFP (+), LDLR (-/-), ApoB (100/100) |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR24072155 | Mus musculus | Thoracic aorta |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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