SRR24083037 (PRJNA950066)

Processing Status: Completed

General Details

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Sample Name S09_ribo_RCNMV_5dpi
Organism Arabidopsis thaliana
Release Date 6/2023

Sample Links

Run Details

Spots 104595421
Total Bases 10459542100
Total Bases 10459542100

Repository Details

SRA SRR24083037
ENA SRR24083037
BioProject PRJNA950066

Experiment Details

Title

Sample Details

Run Accession SRR24083037
Total Number Of Spots (Original File)) 104595421
Total Number Of Bases (Original File) 10459542100
Average Read Length 100
Original File Size (Mb) 2938
Experiment Id SRX19884015
Library Name S09
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina NovaSeq 6000
Sra Project Accession (Srp) SRP431103
Pubmed Id <NA>
Sample SRS17238260
Biosample SAMN33970959
Sample Type simple
Organism Taxid 3702
Organism Arabidopsis thaliana
Sample Name S09_ribo_RCNMV_5dpi
Center Name Iowa State University
Submission SRA1612614
Month 6
Year 2023
Library-Type Ribo-Seq
Replicate-Number 8
Tissue Leaf
Stage 5 days post infection
Strain Col 0
Age 1 month
Genotype dcl2-1/dcl4-2t double knock-out; Germplasm CS66078
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR24083037 Arabidopsis thaliana Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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