SRR24083039 (PRJNA950066)

Processing Status: Completed

General Details

View quality reports

Sample Name S07_ribo_RCNMV_5dpi
Organism Arabidopsis thaliana
Release Date 6/2023

Sample Links

Run Details

Spots 131616976
Total Bases 13161697600
Total Bases 13161697600

Repository Details

SRA SRR24083039
ENA SRR24083039
BioProject PRJNA950066

Experiment Details

Title

Sample Details

Run Accession SRR24083039
Total Number Of Spots (Original File)) 131616976
Total Number Of Bases (Original File) 13161697600
Average Read Length 100
Original File Size (Mb) 3612
Experiment Id SRX19884013
Library Name S07
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina NovaSeq 6000
Sra Project Accession (Srp) SRP431103
Pubmed Id <NA>
Sample SRS17238259
Biosample SAMN33970957
Sample Type simple
Organism Taxid 3702
Organism Arabidopsis thaliana
Sample Name S07_ribo_RCNMV_5dpi
Center Name Iowa State University
Submission SRA1612614
Month 6
Year 2023
Library-Type Ribo-Seq
Replicate-Number 6
Tissue Leaf
Stage 5 days post infection
Strain Col 0
Age 1 month
Genotype dcl2-1/dcl4-2t double knock-out; Germplasm CS66078
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR24083039 Arabidopsis thaliana Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About