SRR24083040 (PRJNA950066)

Processing Status: Completed

General Details

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Sample Name S06_ribo_RCNMV_5dpi
Organism Arabidopsis thaliana
Release Date 6/2023

Sample Links

Run Details

Spots 174949584
Total Bases 17494958400
Total Bases 17494958400

Repository Details

SRA SRR24083040
ENA SRR24083040
BioProject PRJNA950066

Experiment Details

Title

Sample Details

Run Accession SRR24083040
Total Number Of Spots (Original File)) 174949584
Total Number Of Bases (Original File) 17494958400
Average Read Length 100
Original File Size (Mb) 4724
Experiment Id SRX19884012
Library Name S06
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina NovaSeq 6000
Sra Project Accession (Srp) SRP431103
Pubmed Id <NA>
Sample SRS17238256
Biosample SAMN33970956
Sample Type simple
Organism Taxid 3702
Organism Arabidopsis thaliana
Sample Name S06_ribo_RCNMV_5dpi
Center Name Iowa State University
Submission SRA1612614
Month 6
Year 2023
Library-Type Ribo-Seq
Replicate-Number 5
Tissue Leaf
Stage 5 days post infection
Strain Col 0
Age 1 month
Genotype dcl2-1/dcl4-2t double knock-out; Germplasm CS66078
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR24083040 Arabidopsis thaliana Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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