SRR24083061 (PRJNA950066)
General Details
| Sample Name | S20_ribo_RCNMV_8dpi |
|---|---|
| Organism | Arabidopsis thaliana |
| Release Date | 6/2023 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 87428067 |
|---|---|
| Total Bases | 8742806700 |
| Total Bases | 8742806700 |
Repository Details
| SRA | SRR24083061 |
|---|---|
| ENA | SRR24083061 |
| BioProject | PRJNA950066 |
Experiment Details
| Title |
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Sample Details
| Run Accession | SRR24083061 |
|---|---|
| Total Number Of Spots (Original File)) | 87428067 |
| Total Number Of Bases (Original File) | 8742806700 |
| Average Read Length | 100 |
| Original File Size (Mb) | 2422 |
| Experiment Id | SRX19883991 |
| Library Name | S20 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina NovaSeq 6000 |
| Sra Project Accession (Srp) | SRP431103 |
| Pubmed Id | <NA> |
| Sample | SRS17238236 |
| Biosample | SAMN33970969 |
| Sample Type | simple |
| Organism Taxid | 3702 |
| Organism | Arabidopsis thaliana |
| Sample Name | S20_ribo_RCNMV_8dpi |
| Center Name | Iowa State University |
| Submission | SRA1612614 |
| Month | 6 |
| Year | 2023 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 18 |
| Stage | 8 days post infection |
| Strain | Col 0 |
| Age | 1 month |
| Genotype | dcl2-1/dcl4-2t double knock-out; Germplasm CS66078 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR24083061 | Arabidopsis thaliana | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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