SRR26979500 (PRJNA1046391)

Processing Status: Completed

General Details

View quality reports

Sample Name GSM7921729
Organism Homo sapiens
Release Date 12/2023

Sample Links

Run Details

Spots 39597226
Total Bases 2613416916
Total Bases 2613416916

Repository Details

SRA SRR26979500
ENA SRR26979500
BioProject PRJNA1046391

Experiment Details

Title Riboseq_K562_61_IGHMBP2_Rep2

Sample Details

Run Accession SRR26979500
Total Number Of Spots (Original File)) 39597226
Total Number Of Bases (Original File) 2613416916
Average Read Length 66
Original File Size (Mb) 862
Experiment Id SRX22672785
Library Name GSM7921729
Library Strategy OTHER
Library Selection other
Library Source OTHER
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP474827
Pubmed Id <NA>
Sample SRS19667699
Biosample SAMN38492557
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM7921729
Center Name Stephen Floor, Cell and Tissue Biology, University of California, San Francisco
Submission SRA1759613
Month 12
Year 2023
Sample Source K-562
Sample Title Riboseq_K562_61_IGHMBP2_Rep2
Library-Type Ribo-Seq
Replicate-Number 2.0
Tissue Bone
Cell-Line K562
Genotype IGHMBP2 KO; expression is fully deleted in K-562 expressing CRISPRi machinery (doi: 10.1016/j.cell.2014.09.029)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR26979500 Homo sapiens K-562 K562 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About