SRR26979502 (PRJNA1046391)

Processing Status: Completed

General Details

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Sample Name GSM7921727
Organism Homo sapiens
Release Date 12/2023

Sample Links

Run Details

Spots 29576911
Total Bases 1952076126
Total Bases 1952076126

Repository Details

SRA SRR26979502
ENA SRR26979502
BioProject PRJNA1046391

Experiment Details

Title Riboseq_K562_115_IGHMBP2_Rep2

Sample Details

Run Accession SRR26979502
Total Number Of Spots (Original File)) 29576911
Total Number Of Bases (Original File) 1952076126
Average Read Length 66
Original File Size (Mb) 641
Experiment Id SRX22672783
Library Name GSM7921727
Library Strategy OTHER
Library Selection other
Library Source OTHER
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP474827
Pubmed Id <NA>
Sample SRS19667697
Biosample SAMN38492559
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM7921727
Center Name Stephen Floor, Cell and Tissue Biology, University of California, San Francisco
Submission SRA1759613
Month 12
Year 2023
Sample Source K-562
Sample Title Riboseq_K562_115_IGHMBP2_Rep2
Library-Type Ribo-Seq
Replicate-Number 2.0
Tissue Bone
Cell-Line K562
Genotype IGHMBP2 KO; expression is fully deleted in K-562 expressing CRISPRi machinery (doi: 10.1016/j.cell.2014.09.029)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR26979502 Homo sapiens K-562 K562 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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