SRR26979505 (PRJNA1046391)

Processing Status: Completed

General Details

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Sample Name GSM7921724
Organism Homo sapiens
Release Date 12/2023

Sample Links

Run Details

Spots 32937951
Total Bases 2173904766
Total Bases 2173904766

Repository Details

SRA SRR26979505
ENA SRR26979505
BioProject PRJNA1046391

Experiment Details

Title Riboseq_K562_118_IGHMBP2_Rep1

Sample Details

Run Accession SRR26979505
Total Number Of Spots (Original File)) 32937951
Total Number Of Bases (Original File) 2173904766
Average Read Length 66
Original File Size (Mb) 723
Experiment Id SRX22672780
Library Name GSM7921724
Library Strategy OTHER
Library Selection other
Library Source OTHER
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP474827
Pubmed Id <NA>
Sample SRS19667694
Biosample SAMN38492562
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM7921724
Center Name Stephen Floor, Cell and Tissue Biology, University of California, San Francisco
Submission SRA1759613
Month 12
Year 2023
Sample Source K-562
Sample Title Riboseq_K562_118_IGHMBP2_Rep1
Library-Type Ribo-Seq
Replicate-Number 1.0
Tissue Bone
Cell-Line K562
Genotype IGHMBP2 HET; expression is partially deleted in K-562 expressing CRISPRi machinery (doi: 10.1016/j.cell.2014.09.029)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR26979505 Homo sapiens K-562 K562 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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