SRR27184615 (PRJNA1051495)
Processing Status: Completed
General Details
| Sample Name | GSM7968159 |
|---|---|
| Organism | Mus musculus |
| Release Date | 2/2024 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 33751539 |
|---|---|
| Total Bases | 2531365425 |
| Total Bases | 2531365425 |
Repository Details
| SRA | SRR27184615 |
|---|---|
| ENA | SRR27184615 |
| BioProject | PRJNA1051495 |
Experiment Details
| Title | NPM_KO_2_RPFs |
|---|
Sample Details
| Run Accession | SRR27184615 |
|---|---|
| Total Number Of Spots (Original File)) | 33751539 |
| Total Number Of Bases (Original File) | 2531365425 |
| Average Read Length | 75 |
| Original File Size (Mb) | 967 |
| Experiment Id | SRX22864873 |
| Library Name | GSM7968159 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP477496 |
| Pubmed Id | <NA> |
| Sample | SRS19839109 |
| Biosample | SAMN38776572 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM7968159 |
| Center Name | CRUK Scotland Institute |
| Submission | SRA1767438 |
| Month | 2 |
| Year | 2024 |
| Author | Giacomelli |
| Sample Source | Small intestine epithelial extractions |
| Sample Title | NPM_KO_2_RPFs |
| Library-Type | Ribo-Seq |
| Replicate-Number | 0.0 |
| Condition | KO |
| Inhibitor | 0.0 |
| Timepoint | 3 days post-inductionNANANA |
| Tissue | intestin |
| Cell-Line | 0.0 |
| Cellular-Compartment | Ribosome protected fragments |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | male |
| Strain | 0.0 |
| Age | 0.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | Villin-CreER-T2 Apc fl/fl Kras G12D/+ Npm1 fl/fl |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | NARUB46.4a |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR27184615 | Mus musculus | Small intestine epithelial extractions | 0.0 | Ribo-Seq | 0.0 |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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