SRR27184618 (PRJNA1051495)

Processing Status: Completed

General Details

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Sample Name GSM7968156
Organism Mus musculus
Release Date 2/2024

Sample Links

Run Details

Spots 41200655
Total Bases 3090049125
Total Bases 3090049125

Repository Details

SRA SRR27184618
ENA SRR27184618
BioProject PRJNA1051495

Experiment Details

Title NPM_WT_3_RPFs

Sample Details

Run Accession SRR27184618
Total Number Of Spots (Original File)) 41200655
Total Number Of Bases (Original File) 3090049125
Average Read Length 75
Original File Size (Mb) 1171
Experiment Id SRX22864870
Library Name GSM7968156
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP477496
Pubmed Id <NA>
Sample SRS19839108
Biosample SAMN38776575
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM7968156
Center Name CRUK Scotland Institute
Submission SRA1767438
Month 2
Year 2024
Author Giacomelli
Sample Source Small intestine epithelial extractions
Sample Title NPM_WT_3_RPFs
Library-Type Ribo-Seq
Condition Wild Type
Timepoint 3 days post-inductionNA
Tissue intestin
Cellular-Compartment Ribosome protected fragments
Sex female
Genotype Villin-CreER-T2 Apc fl/fl Kras G12D/+
Individual NA_RUB37.6b
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR27184618 Mus musculus Small intestine epithelial extractions Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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