SRR27184619 (PRJNA1051495)

Processing Status: Completed

General Details

View quality reports

Sample Name GSM7968155
Organism Mus musculus
Release Date 2/2024

Sample Links

Run Details

Spots 35462212
Total Bases 2659665900
Total Bases 2659665900

Repository Details

SRA SRR27184619
ENA SRR27184619
BioProject PRJNA1051495

Experiment Details

Title NPM_WT_2_RPFs

Sample Details

Run Accession SRR27184619
Total Number Of Spots (Original File)) 35462212
Total Number Of Bases (Original File) 2659665900
Average Read Length 75
Original File Size (Mb) 1015
Experiment Id SRX22864869
Library Name GSM7968155
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP477496
Pubmed Id <NA>
Sample SRS19839106
Biosample SAMN38776576
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM7968155
Center Name CRUK Scotland Institute
Submission SRA1767438
Month 2
Year 2024
Author Giacomelli
Sample Source Small intestine epithelial extractions
Sample Title NPM_WT_2_RPFs
Library-Type Ribo-Seq
Condition Wild Type
Timepoint 3 days post-inductionNA
Tissue intestin
Cellular-Compartment Ribosome protected fragments
Sex male
Genotype Villin-CreER-T2 Apc fl/fl Kras G12D/+
Individual NA_RUB42.2b
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR27184619 Mus musculus Small intestine epithelial extractions Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About