SRR2724709 (PRJNA299160)

General Details

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Sample Name GSM1911094
Organism Mus musculus
Release Date 12/2015

Sample Links

Run Details

Spots 369186400
Total Bases 18828506400
Total Bases 18828506400

Repository Details

SRA SRR2724709
ENA SRR2724709
BioProject PRJNA299160

Experiment Details

Title BMDC footprints, lactimidomycin-treated, LPS stimulated

Sample Details

Run Accession SRR2724709
Total Number Of Spots (Original File)) 369186400
Total Number Of Bases (Original File) 18828506400
Average Read Length 51
Original File Size (Mb) 11822
Experiment Id SRX1354279
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP064972
Pubmed Id 26638175
Sample SRS1120861
Biosample SAMN04194189
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1911094
Center Name GEO
Submission SRA305989
Month 12
Year 2015
Author Fields
Sample Source Dendritic cells
Sample Title BMDC footprints, lactimidomycin-treated, LPS stimulated
Library-Type Ribo-Seq
Condition Test
Inhibitor Lactimidomycin
Tissue Bone
Cell-Line Bone marrow-derived dendritic cells
Strain C57BL/6J
Age 6-8 weeks
Stimulation Mix of 0, 1, 2, 4, 6, 8, 9, and 12 h LPS
Mode Of Rrna Depletion RiboZero
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2724709 Mus musculus Dendritic cells Bone marrow-derived dendritic cells Ribo-Seq Lactimidomycin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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