SRR2724716 (PRJNA299160)

Processing Status: Completed

General Details

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Sample Name GSM1911101
Organism Mus musculus
Release Date 12/2015

Sample Links

Run Details

Spots 57170514
Total Bases 2915696214
Total Bases 2915696214

Repository Details

SRA SRR2724716
ENA SRR2724716
BioProject PRJNA299160

Experiment Details

Title BMDC footprints, no drug treatment, 8 h LPS

Sample Details

Run Accession SRR2724716
Total Number Of Spots (Original File)) 57170514
Total Number Of Bases (Original File) 2915696214
Average Read Length 51
Original File Size (Mb) 1906
Experiment Id SRX1354286
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP064972
Pubmed Id 26638175
Sample SRS1120854
Biosample SAMN04194196
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1911101
Center Name GEO
Submission SRA305989
Month 12
Year 2015
Author Fields
Sample Source Dendritic cells
Sample Title BMDC footprints, no drug treatment, 8 h LPS
Library-Type Ribo-Seq
Condition Test
Inhibitor Frozen
Timepoint 8h
Tissue Bone
Cell-Line Bone marrow-derived dendritic cells
Strain C57BL/6J
Age 6-8 weeks
Stimulation 8 h LPS
Mode Of Rrna Depletion RiboZero
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR2724716 Mus musculus Dendritic cells Bone marrow-derived dendritic cells Ribo-Seq Frozen
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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