SRR27329454 (PRJNA1055925)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM7989993 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 9/2024 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 9955797 |
|---|---|
| Total Bases | 287292145 |
| Total Bases | 287292145 |
Repository Details
| SRA | SRR27329454 |
|---|---|
| ENA | SRR27329454 |
| BioProject | PRJNA1055925 |
Experiment Details
| Title | OCI-AML3 cells, DMSO, Ribo-seq, replicate 2 |
|---|
Sample Details
| Run Accession | SRR27329454 |
|---|---|
| Total Number Of Spots (Original File)) | 9955797 |
| Total Number Of Bases (Original File) | 287292145 |
| Average Read Length | 28 |
| Original File Size (Mb) | 131 |
| Experiment Id | SRX23006466 |
| Library Name | GSM7989993 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 4000 |
| Sra Project Accession (Srp) | SRP479687 |
| Pubmed Id | <NA> |
| Sample | SRS19970234 |
| Biosample | SAMN39081882 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM7989993 |
| Center Name | University of Perugia |
| Submission | SRA1774730 |
| Month | 9 |
| Year | 2024 |
| Author | Mecucci |
| Sample Source | OCI-AML3 |
| Sample Title | OCI-AML3 cells, DMSO, Ribo-seq, replicate 2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Tissue | Myeloid |
| Cell-Line | OCI-AML3NPM1-mutated acute myeloid leukemia cells |
| Cellular-Compartment | DMSO |
| Genotype | NPM1 gene mutation (type A) |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR27329454 | Homo sapiens | OCI-AML3 | OCI-AML3NPM1-mutated acute myeloid leukemia cells | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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