SRR27790689 (PRJNA1071174)

Processing Status: Not Yet Started

General Details

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Sample Name GSM8047475
Organism Homo sapiens
Release Date 10/2024

Sample Links

Run Details

Spots 106273121
Total Bases 10733585221
Total Bases 10733585221

Repository Details

SRA SRR27790689
ENA SRR27790689
BioProject PRJNA1071174

Experiment Details

Title Riboseq_KO_DMSO_Rep1

Sample Details

Run Accession SRR27790689
Total Number Of Spots (Original File)) 106273121
Total Number Of Bases (Original File) 10733585221
Average Read Length 101
Original File Size (Mb) 3455
Experiment Id SRX23454851
Library Name GSM8047475
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina NovaSeq 6000
Sra Project Accession (Srp) SRP486934
Pubmed Id <NA>
Sample SRS20307878
Biosample SAMN39677017
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM8047475
Center Name UCSF
Submission SRA1794714
Month 10
Year 2024
Author Aghi
Sample Source Bone
Sample Title Riboseq_KO_DMSO_Rep1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition KO
Tissue Bone
Cell-Line U-2OSepithelial
Cellular-Compartment DMSO
Genotype G3BP1/2 KO, G3BP deletions by CRISPR Cas9 machinery (doi: 10.1083/jcb.201508028)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR27790689 Homo sapiens Bone U-2OSepithelial Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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