SRR27792541 (PRJNA1071172)

Processing Status: Not Yet Started

General Details

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Sample Name GSM8047419
Organism Homo sapiens
Release Date 10/2024

Sample Links

Run Details

Spots 71159478
Total Bases 10745081178
Total Bases 10745081178

Repository Details

SRA SRR27792541
ENA SRR27792541
BioProject PRJNA1071172

Experiment Details

Title Riboseq_KO_water_Rep2

Sample Details

Run Accession SRR27792541
Total Number Of Spots (Original File)) 71159478
Total Number Of Bases (Original File) 10745081178
Average Read Length 151
Original File Size (Mb) 3864
Experiment Id SRX23456180
Library Name GSM8047419
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina NovaSeq 6000
Sra Project Accession (Srp) SRP486953
Pubmed Id <NA>
Sample SRS20309216
Biosample SAMN39681382
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM8047419
Center Name UCSF
Submission SRA1794749
Month 10
Year 2024
Author Aghi
Sample Source Bone
Sample Title Riboseq_KO_water_Rep2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition KO
Tissue Bone
Cell-Line U-2OSepithelial
Genotype G3BP1/2 KO, G3BP deletions by CRISPR Cas9 machinery (doi: 10.1083/jcb.201508028)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR27792541 Homo sapiens Bone U-2OSepithelial Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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